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I think the real purpose of the AAP paper is less straightforward than you indicate. Their recommendation is to change laws to allow Doctors to perform this ‘ritual nick’. What they really want is to build trust with communities who don’t trust American Pediatricians.
We’ll see, but unless one of the following happens, their recommendation is merely lip service: (i) the AAP actively lobbies congress to change existing laws, or (ii) AAP goes to federal court, or files a friend of the court brief in support of performing a ritual nick. I don’t think they have any intention of doing either. Acting in that way is inconsistent with the dissonance you correctly note is evident in the paper. It would create an incredible controversy.
So, if the stated purpose is not credible, what’s a reasonable alternative motivation? My guess is that pediatricians aren’t seeing children from cultures in which FGM is performed. They want to indicate to families that they understand, but there’s nothing they can do. Oh, and by the way, remember to bring your child in for a checkup.
I don’t mean to defend what the AAP is doing. In my view, they’re sacrificing girls’ autonomy for a narrow public health gain. [There are public health issues in the area that effect larger communities than the recent immigrant groups the AAP is looking to reassure. After all, if kids don't see the doctor, they don't get vaccinated. That effects everyone.] They may actually save some lives in the process. And they might, although this seems far less plausible to me, save some girls from being horribly mutilated.
You can see the incentives from their view. ‘Ritual nicks’ will never be a live possibility, anyway. So, no harm, no foul. In the meantime we improve relations with and access to a certain population.
There are two troubles. First, as you note, it could impede initiatives to stop more extensive forms of mutilation internationally. Second, even the symbolic sacrifice of girls’ autonomy is repugnant at a time when girls’ and women’s actual reproductive rights are being severely curtailed, and when it has become legal for Doctors to lie to their pregnant patients, thoroughly undermining their autonomy.
http://www.cnn.com/2010/OPINION/04/28/carr.abortion.oklahoma/index.html
Still, it’s not right to think that the U.S. is going to be a “safe haven” for FGM. That’s completely implausible, and this AAP paper does nothing to make that a legitimate possibility.